Clean Up Computer

Help!..Missing Registry Keys!?

I just gotten over an issue with trojans and malware on my computer so i installed an anti spy program( super anti-spy) but i noticed i still had issues with unknown pop-ups on my browser so i also downloaded an anti-malware(Malware Bytes)
and after finally getting my computer clean i think i also erased some very imporatant registry keys needed to run my windows xp and certain websites properly..do i have to go to a computer specialist?

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